Table Detail Report
MIC_ORDER_LAB
| Column Section | Relationship Section | Top of Page |
Table-level Detail
| Description: | Microbiology Orders |
| Definition: | This table contains the order level activity information for ordered microbiology procedures. Thistable is filled out initially during the order conversation and is updated again when the procedureis received into its performing service resource. |
| Table Type: | ACTIVITY |
Column Detail - MIC_ORDER_LAB
| Column Name | Type | Null? | Definition |
|---|---|---|---|
| ARCHIVE_DT_TM | DATETIME | Y | This field is not used at this time. |
| CATALOG_CD | DOUBLE | N | This field contains the code value assigned to the procedure as defined in the DCPtools.exe application. Ordered procedure code values are stored on code set 200 Order Catalog. |
| COMPLETE_DT_TM | DATETIME | Y | This field identifies the date and time the procedure was completed. |
| CULTURE_START_DT_TM | DATETIME | Y | This field identifies the start date and time of the orderable procedure. This field is updated when the procedure is received into its performing service resource. |
| DOWNLOAD_IND | DOUBLE | Y | This field relates to the blood culture instrument interfaces. Once all of the media associated with a procedure has been successfully downloaded to the instrument this field will be set to 1 indicating that it has downloaded. If not set to 1, user can re-download the procedure again. Valid values include: 1 = downloaded 0 = not downloaded |
| EVENT_FLAG | DOUBLE | Y | Obsolete. This field is not used at this time. |
| INTERP_TEXT_ID | DOUBLE | N | Identifies the long_text_id value from the long_text table that associates the interpretive data text with this orderable procedure. |
| NOSOCOMIAL_IND | DOUBLE | Y | Nosocomial refers to an infection that a patient gets while in the hospital. Customization can be done to the number of hours between patient admission and specimen collection that would qualify a culture as a nosocomial infection. So this column indicates when a positive culture is deemed to be an infection that developed while the patient was in the hospital. |
| ORDER_ID | DOUBLE | N | This field contains the unique value assigned to each orderable procedure associated with an order. For example: if there are two procedures on the same accession number, then each procedure will have a unique order id. |
| ORDER_LOCK_DT_TM | DATETIME | Y | This field identifies the date and time the record was locked. When the user exits the microbiology application accessing the accession this field will be set to null. |
| ORDER_LOCK_ID | DOUBLE | N | This field identifies the id of the person that currently has this order_id locked. The order_lock_id corresponds to the person_id on the prsnl table, which identifies the user. When the user exits the microbiology application accessing the accession this field will be set to null. |
| POSITIVE_IND | DOUBLE | Y | This field indicates whether or not the procedure is considered positive. Microbiology procedures are considered positive when a preliminary or final report is issued that includes a positive response or organism. Valid values include: 0 = Not positive 1 = Positive |
| PRELIMINARY_POSITIVE_IND | DOUBLE | Y | This field is not used at this time. |
| PURGE_DT_TM | DATETIME | Y | This field is not used at this time. |
| REPORT_IND | DOUBLE | Y | This field indicates whether or not a report has been issued for the procedure. This indicator is used by the microbiology inquiry application to quickly identify if a procedure has a report issued.Valid values include: 0 = No report issued 1 = Report has been issued. |
| RESTORED_DT_TM | DATETIME | Y | This field is not used at this time. |
| SERVICE_RESOURCE_CD | DOUBLE | N | Identifies the service_resource code_value (code set 221 service resource) for the orderable procedure. This is the service resource code where the procedure is currently located and where interpretive data text will be extracted from for this procedure. This field is only filled out if there is interpretive data associated with the orderable procedure. |
| STATUS_CD | DOUBLE | N | This field identifies the current status of the orderable procedure. The status code_value is fromcode set 1031 & 1905 Micro Status. |
| SUSCEPTIBILITY_IND | DOUBLE | Y | This field indicates whether or not a susceptibility has been ordered for the procedure. This indicator is used by the microbiology inquiry application to quickly identify if a procedure has a susceptibility ordered. Valid values include: 0 = No susceptibilities ordered 1 = Susceptibilities ordered |
| SUS_INSTR_ID_NBR | CHAR(18) | Y | This field is not used at this time. |
| TASK_ASSAY_CD | DOUBLE | N | Identifies the task_assay_cd from the discrete_task_assay code set(14003) for the orderable procedure. This field is only filled out if there is interpretive data associated with the orderable procedure. |
| UPDT_APPLCTX | DOUBLE | N | The application context number from the record info block. |
| UPDT_CNT | DOUBLE | N | Set to 0 on insert. Incremented by 1 on update. Used to recognize update conflict where data in a row updated by one application is at risk of being lost by a second application attempting to update the row. |
| UPDT_DT_TM | DATETIME | N | The date and time the row was last inserted or updated. |
| UPDT_ID | DOUBLE | N | The person_id of the person from the personnel table (prsnl) that caused the last insert or update of the row in the table. |
| UPDT_TASK | DOUBLE | N | The registered (assigned) task number for the process that inserted or updated the row. |
Relationship Detail - MIC_ORDER_LAB
| Child Column in MIC_ORDER_LAB(FK) | Parent Table Name | Parent Column Name | |
|---|---|---|---|
| Parents: | TASK_ASSAY_CD | DISCRETE_TASK_ASSAY | TASK_ASSAY_CD |
| INTERP_TEXT_ID | LONG_TEXT | LONG_TEXT_ID | |
| ORDER_ID | ORDERS | ORDER_ID | |
| CATALOG_CD | ORDER_CATALOG | CATALOG_CD | |
| SERVICE_RESOURCE_CD | SERVICE_RESOURCE | SERVICE_RESOURCE_CD |
| Parent Column in MIC_ORDER_LAB (PK) | Child Table Name | Child Column Name | |
|---|---|---|---|
| Children: | ORDER_ID | MIC_ACT_ANG_SUM_RPT | ORDER_ID |
| MIC_ANG_AUTOMATED | ORDER_ID | ||
| MIC_MEDIA_ACTIVITY | ORDER_ID | ||
| MIC_MEDS_ACTIVITY | ORDER_ID | ||
| MIC_PATHOGEN | ORDER_ID | ||
| MIC_REQUIRED_TASK | ORDER_ID |
MIC_ORGANISM_DATA
| Column Section | Relationship Section | Top of Page |
Table-level Detail
| Description: | Microbiology Organism Data |
| Definition: | This table contains reference information relating to organisms defined on code set 1021. |
| Table Type: | REFERENCE |
Column Detail - MIC_ORGANISM_DATA
| Column Name | Type | Null? | Definition |
|---|---|---|---|
| ORGANISM_ID | DOUBLE | N | This field identifies the code value of the organism from code set 1021. |
| ORGANISM_TYPE | DOUBLE | Y | This field indicates the type of organism associated with this record. Valid values include: 1 = Bacteria 2 = Mycobacteria 3 = Fungus 4 = Parasite 5 = Virus 6 = Yeast |
| ORG_CLASS_FLAG | DOUBLE | Y | This field identifies the classification of the organism associated with this record. Organisms are associated with a classification at the time they are defined in the Organism tool. |
| PARENT_CD | DOUBLE | N | This field identifies the code value of the parent organism associated with this record. For example, if this is an organism record its parent organism would be the genus to which it is associated.The hierarchical levels associated with organisms is organisms are associated with genuses. Genuses are associated with families. Families are associated with sections. All hierarchical relationshi |
| POSITIVE_IND | DOUBLE | Y | This field indicates whether the organism if used in a report task should set the culture to positive. Valid values include: 0 = Negative 1 = Positive |
| QC_IND | DOUBLE | Y | This field is not used at this time. |
| REPORT_NAME | CHAR(15) | Y | This field is not used at this time. |
| UPDT_APPLCTX | DOUBLE | N | The application context number from the record info block. |
| UPDT_CNT | DOUBLE | N | Set to 0 on insert. Incremented by 1 on update. Used to recognize update conflict where data in a row updated by one application is at risk of being lost by a second application attempting to update the row. |
| UPDT_DT_TM | DATETIME | N | The date and time the row was last inserted or updated. |
| UPDT_ID | DOUBLE | N | The person_id of the person from the personnel table (prsnl) that caused the last insert or update of the row in the table. |
| UPDT_TASK | DOUBLE | N | The registered (assigned) task number for the process that inserted or updated the row. |
Relationship Detail - MIC_ORGANISM_DATA
| Parent Column in MIC_ORGANISM_DATA (PK) | Child Table Name | Child Column Name | |
|---|---|---|---|
| Children: | ORGANISM_ID | MIC_ABN_SUS_RESULT | ORGANISM_CD |
| MIC_EVENT_LOG | ORGANISM_CD | ||
| MIC_ORGANISM_ID | ID_ORGANISM_CD | ||
| MIC_PATHOGEN | PATHOGEN_CD | ||
| MIC_REQUIRED_TASK | ORGANISM_CD | ||
| MIC_SUS_FIRST_LEVEL_INTERP | ORGANISM_GROUPING_CD | ||
| MIC_TASK_LOG | ORGANISM_CD | ||
| MIC_VALID_SUS_PANEL | ORGANISM_GROUPING_CD | ||
| MIC_VALID_SUS_RESULT | ORGANISM_CD |
MIC_ORGANISM_ID
| Column Section | Relationship Section | Top of Page |
Table-level Detail
| Description: | Microbiology Organism Identification |
| Definition: | This table contains information regarding organism identifications performed on an instrument and transmitted to the Cerner system. |
| Table Type: | ACTIVITY |
Column Detail - MIC_ORGANISM_ID
| Column Name | Type | Null? | Definition |
|---|---|---|---|
| BIO_TYPE_NUMBER | VARCHAR(100) | Y | This field identifies the organism bio-type code sent from the susceptibility instrument interface. |
| ID_ORGANISM_CD | DOUBLE | N | This field identifies the code value of the organism associated with the organism id task. This is the organism code that was sent to the Cerner system from the susceptibility instrument interface. The organism code received from the instrument is translated from the mic_instr_trans table and the corresponding code value is placed in this field. Organisms are defined on code set 1021. |
| ID_SEQ | DOUBLE | N | This field contains a unique value that uniquely identifies more than one organism identification for the same task_log_id. Some instruments can send multiple identifications from which the user will make a selection as to the actual identification of the organism. |
| ID_THRESHOLD | DOUBLE | Y | This field identifies the probability percentage for the organism identification. The probability is the instrument's confidence percentage on which identification is the most likely based on its biochemical reactions. This information is sent to the Cerner system from some of the susceptibility instrument interfaces. |
| TASK_LOG_ID | DOUBLE | N | This field identifies the unique value assigned to the organism id task from the mic_task_log table thus associating the organism information with the organism id task. |
| UPDT_APPLCTX | DOUBLE | N | The application context number from the record info block. |
| UPDT_CNT | DOUBLE | N | Set to 0 on insert. Incremented by 1 on update. Used to recognize update conflict where data in a row updated by one application is at risk of being lost by a second application attempting to update the row. |
| UPDT_DT_TM | DATETIME | N | The date and time the row was last inserted or updated. |
| UPDT_ID | DOUBLE | N | The person_id of the person from the personnel table (prsnl) that caused the last insert or update of the row in the table. |
| UPDT_TASK | DOUBLE | N | The registered (assigned) task number for the process that inserted or updated the row. |
Relationship Detail - MIC_ORGANISM_ID
| Child Column in MIC_ORGANISM_ID(FK) | Parent Table Name | Parent Column Name | |
|---|---|---|---|
| Parents: | ID_ORGANISM_CD | MIC_ORGANISM_DATA | ORGANISM_ID |
| TASK_LOG_ID | MIC_TASK_LOG | TASK_LOG_ID |
MIC_ORGANISM_OBSERVATION
| Column Section | Relationship Section | Top of Page |
Table-level Detail
| Description: | Microbiology Organism Observation |
| Definition: | This table contains the quantity and the morphological description of each organism observed. |
| Table Type: | ACTIVITY |
Column Detail - MIC_ORGANISM_OBSERVATION
| Column Name | Type | Null? | Definition |
|---|---|---|---|
| COMMENT_SEQ | DOUBLE | Y | This field is not used at this time. |
| CRITICAL_IND | DOUBLE | Y | ** Obsolete ** This column is no longer being used. This column mirrors the critical indicator in micdbtools. The selection value is captured here so that if the user changes the selection in the critical indicator checkbox in micdbtool the history is captured in this column. ** Obsolete ** |
| MEDIA_CD | DOUBLE | N | This field contains the code value of the specific type of media identified for this procedure. Media types are defined on code set 2051 Specimen Containers. |
| MEDIA_SEQ | DOUBLE | N | This field contains a unique value that uniquely identifies more than occurrence of the same media code for a given organism. |
| OBSERVATION | VARCHAR(100) | Y | This field identifies the morphological description of the organism for each piece of media. |
| QUANTITATION_CD | DOUBLE | N | This field identifies the code value of the quantity associated with the media and organism. Organism quantity codes are defined on code set 1023 Quantitations. |
| REPORT_IND | DOUBLE | Y | This field includes an indicator documenting whether or not the quantity for the associated organism should be linked to the report. Only one quantity may be linked per organism. |
| TASK_LOG_ID | DOUBLE | N | This field contains the unique value assigned to the organism observation task from the mic_task_log table thus associating the organism quantity and description with the organism observation task. |
| UPDT_APPLCTX | DOUBLE | N | The application context number from the record info block. The UPDT family of columns are typically used for housekeeping and external system process and should never be depended on for solution specific logic. |
| UPDT_CNT | DOUBLE | N | Set to 0 on insert. Incremented by 1 on update. Used to recognize update conflict where data in a row updated by one application is at risk of being lost by a second application attempting to update the row. The UPDT family of columns are typically used for housekeeping and external system process and should never be depended on for solution specific logic. |
| UPDT_DT_TM | DATETIME | N | The date and time the row was last inserted or updated. The UPDT family of columns are typically used for housekeeping and external system process and should never be depended on for solution specific logic. |
| UPDT_ID | DOUBLE | N | The person_id of the person from the personnel table (prsnl) that caused the last insert or update of the row in the table. The UPDT family of columns are typically used for housekeeping and external system process and should never be depended on for solution specific logic. |
| UPDT_TASK | DOUBLE | N | The registered (assigned) task number for the process that inserted or updated the row. The UPDT family of columns are typically used for housekeeping and external system process and should never be depended on for solution specific logic. |
Relationship Detail - MIC_ORGANISM_OBSERVATION
| Child Column in MIC_ORGANISM_OBSERVATION(FK) | Parent Table Name | Parent Column Name | |
|---|---|---|---|
| Parents: | TASK_LOG_ID | MIC_TASK_LOG | TASK_LOG_ID |
| Parent Column in MIC_ORGANISM_OBSERVATION (PK) | Child Table Name | Child Column Name | |
|---|---|---|---|
| Children: | MEDIA_SEQ | MIC_MEDIA_LOT_RELTN | MEDIA_SEQ |
| TASK_LOG_ID | MIC_MEDIA_LOT_RELTN | TASK_LOG_ID |
MIC_PATHOGEN
| Column Section | Relationship Section | Top of Page |
Table-level Detail
| Description: | Microbiology Suspected Pathogens |
| Definition: | This table contains information regarding the suspected pathogens(organisms) added to the order during the microbiology log in conversation. |
| Table Type: | ACTIVITY |
Column Detail - MIC_PATHOGEN
| Column Name | Type | Null? | Definition |
|---|---|---|---|
| CATALOG_CD | DOUBLE | N | This field contains the code value assigned to the procedure as defined in the DCPtools.exe application. Ordered procedure code values are stored on code set 200 Order Catalog. |
| ORDER_ID | DOUBLE | N | This field contains the unique value assigned to each orderable procedure associated with an order. For example: if there are two procedures on the same accession number, then each procedure will have a unique order id. |
| PATHOGEN_CD | DOUBLE | N | This field identifies the code value of the organism associated with the orderable procedure. Organisms are defined on code set 1021. |
| UPDT_APPLCTX | DOUBLE | N | The application context number from the record info block. |
| UPDT_CNT | DOUBLE | N | Set to 0 on insert. Incremented by 1 on update. Used to recognize update conflict where data in a row updated by one application is at risk of being lost by a second application attempting to update the row. |
| UPDT_DT_TM | DATETIME | N | The date and time the row was last inserted or updated. |
| UPDT_ID | DOUBLE | N | The person_id of the person from the personnel table (prsnl) that caused the last insert or update of the row in the table. |
| UPDT_TASK | DOUBLE | N | The registered (assigned) task number for the process that inserted or updated the row. |
Relationship Detail - MIC_PATHOGEN
| Child Column in MIC_PATHOGEN(FK) | Parent Table Name | Parent Column Name | |
|---|---|---|---|
| Parents: | ORDER_ID | MIC_ORDER_LAB | ORDER_ID |
| PATHOGEN_CD | MIC_ORGANISM_DATA | ORGANISM_ID | |
| CATALOG_CD | ORDER_CATALOG | CATALOG_CD |